Development of a New Computational Approach to the Prediction of Nucleic Acid St

Cover Development of a New Computational Approach to the Prediction of Nucleic Acid St
Development of a New Computational Approach to the Prediction of Nucleic Acid St
Tamar Schlick
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T. Nguyen and D. A. Case, "An All Atom Force Field for Simulations of Proteins and Nucleic . Acids". J. Comp Chem. 7. 230-252(1986).
- 47 - [19] S. C. Harvey and M . Prabhakaran. "Ribose Puckering: Structure. Dynamics. Energetics and The Pseudorotation Cycle". J. Amer. Chem. Soc. 108, 6128-6135 (T986).
[20] L. . Vilsson and . VI. Karplus. "Empirical Energy Functions for Energy Minimization and Dynamics of Nucleic . Acids", J. Comp. Chem. 7 . 591-616 ( 1986).
[21| D.. -\. Pearlman and S. -H. Kim
.... "Conformational Studies of Nucleic . Acids. II. The Conformational Energetics of Commonly Occuring . Nucleosides", J. Bio. Siruc Dyn. 85. 85-98 (1985).
[22] S. Arnott and D. W. L. Hukins. "Optimised Parameters for . A-DNA and B-DNA", Bichem. Biophvs. Res. Comm. 47, 1504-1510 (1972).
[23] . A. Jack. J. E. Ladner and A. Klug, "Crystallographic Refinement of Yeast Phenylalanine Transfer RN A at 2. 5 . -Si Resolution", J. Mol. Biol. 108. 619-649(1976).
[24| The sequence { Xp . . X, . X, . . . . } is said to converge to v if lim .


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